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      <ref-type name="Journal Article">17</ref-type>
      <contributors>
        <authors>
          <author>Shafee Ur Rehman</author>
          <author>Muhammad Abdullah</author>
          <author>Kylym Soodonbekov</author>
          <author>Baiaman Kanatov</author>
          <author>Saiddin Avtandil</author>
        </authors>
      </contributors>
      <titles>
        <title>THE ROLE OF GENE EXPRESSION ALTERATIONS, NON-CODING RNAS, COPY NUMBER VARIATIONS, AND SPLICING IN ALZHEIMER’S DISEASE</title>
        <secondary-title>Journal of Animal and Plant Sciences</secondary-title>
        <alt-title>JAPS</alt-title>
      </titles>
      <dates><year>2025</year><pub-dates><date>2025/11/30</date></pub-dates></dates>
      <volume>35</volume>
      <number>6</number>
      <pages>1467-1478</pages>
      <isbn>1018-7081</isbn>
      <electronic-resource-num>https://doi.org/10.36899/JAPS.2025.6.0126</electronic-resource-num>
      <abstract>&lt;p&gt;The neurodegenerative disorder Alzheimer&amp;rsquo;s&amp;thinsp;disease (AD) advances&amp;thinsp;through progressive stages,&amp;thinsp;which cause cognitive deterioration and neuronal death.&amp;thinsp;The study of&amp;thinsp;early-onset AD shows&amp;thinsp;strong connections to APP, PSEN1 and PSEN2 mutations&amp;thinsp;but recent research&amp;thinsp;demonstrates that multiple&amp;thinsp;molecular pathways play essential&amp;thinsp;roles in disease&amp;thinsp;progression. The review integrates&amp;thinsp;existing knowledge about&amp;thinsp;four essential genetic factors&amp;thinsp;that contribute to Alzheimer&amp;rsquo;s&amp;thinsp;disease development: BACE1 and TREM2&amp;thinsp;expression dysregulation and, non-coding RNAs (e.g., miR-29 and&amp;thinsp;BACE1-AS) and copy number variations&amp;thinsp;(e.g., APP duplications&amp;thinsp;and GRN deletions)&amp;thinsp;and aberrant splicing events&amp;thinsp;(e.g., tau 3R/4R&amp;thinsp;isoform imbalance). The mechanisms work&amp;thinsp;together to disrupt&amp;thinsp;amyloid-beta processing and&amp;thinsp;tau regulation as well&amp;thinsp;as synaptic function&amp;thinsp;and neuroinflammatory pathways which speed&amp;thinsp;up disease progression.&amp;thinsp;The review examines&amp;thinsp;how these factors work&amp;thinsp;together to create&amp;thinsp;AD pathology while discussing&amp;thinsp;their value as&amp;thinsp;diagnostic markers and&amp;thinsp;therapeutic targets. The review&amp;thinsp;demonstrates the need&amp;thinsp;for integrating multiple omics approaches to&amp;thinsp;improve precision medicine&amp;thinsp;approaches for diagnosing&amp;thinsp;and treating Alzheimer&amp;rsquo;s disease.&amp;thinsp;The review demonstrates the intricate nature&amp;thinsp;of AD pathogenesis&amp;thinsp;while advocating for&amp;thinsp;a comprehensive strategy to&amp;thinsp;understand disease mechanisms&amp;thinsp;and create specific therapeutic approaches.&lt;/p&gt;</abstract>
      <keywords><keyword>Gene Expression, Non-coding RNAs, Copy Number Variations, Splicing</keyword></keywords>
      <publisher>Pakistan Agricultural Scientists Forum</publisher>
      <urls><related-urls><url>https://thejaps.org.pk/AbstractView.aspx?mid=2025-JAPS-345</url></related-urls></urls>
    </record>
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